Imagine putting each requirement as a function in my bugtracker. It would be nice? Are there any better tools?
I would say that this is definitely a good idea, because you can easily track how requirements and ideas arose. You can also easily track your progress, time estimates, time spent, etc.
This is what I and many people do. Put the specifications in the form of errors, and then eliminate the errors when they are full functions.
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I apologize for the inital soapbox, but many people forget that documents may have flaws, not just software.