If you have 64-bit input, you can add another 64 bits of removable padding to get 128 bits. Encrypt 128 bits, usually with AES. When decrypting, simply remove the add-on after decryption. There are several different possible fill patterns. You will find some, such as PKCS # 7, built into many AES libraries.
When using fixed-length 64-bit input, you can use random padding if you always knew which 64 bits were data and which 64 bits were padding. Mixing the two will be detrimental.
ETA: with 64-bit values, you can combine two of them to make one 128-bit value. After decryption, divide them into 64-bit.
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