System.Collections
System.Data (many applications have a database)
System.Windows (as a desktop application)
System.Graphics (as above)
System.Diagnostics (provides various objects and methods useful for logging and debugging, it is always important in commercial code).
These namespaces contain important classes to do many everyday things done in most applications, whether the application is web or desktop. Windows is largely only suitable for desktop applications (for example, you said that you do this), and the graphics will greatly praise them (also complements web applications). You would well study all the classes in these namespaces, although you only asked for classes.
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