Wow. The hours worked are trying to figure this out, so I finally posted a question. After 10 minutes, I run through a completely unrelated stream, which pointed me in the right direction.
In Xcode 4, in the Project Navigator, click on the top element, the project, then select the target and click on the "Build Phases" tab. This window has Bundle Copy Resources that will allow you to add the .js files that you need in local resources. Now all the html links, such as:
<script type="text/javascript" src="yourAwesomeCode.js"></script>
will work
sday source share