Use GA to design the network structure (determine if there should be an edge between two neurons or not).
In general, you seem to be talking about direct-connect networks, presumably MLP.
The number of neurons and layers, as well as the connections between neurons, are associated with this network structure. Usually they are completely connected, so each neuron in layer n is connected to each layer n + 1. The training method will determine partial connectivity by training some weights to zero or very small numbers.
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