Files, buffers and splits Oh My!
You ask Vim to change how each individual file and buffer command change to fit your choice and workflow. You go against vim here and it will interfere with your use of Vim partitions.
First of all, you need to understand that Vim does not have the concept of Project boxes, only split / windows. This means that NerdTree and other plugins go to great lengths to emulate the behavior of Project Drawer and ultimately fail.
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