When debugging using Chrome, the only reason the debugger stops inside jQuery files is to use F11 (step by step) when debugging instead of F8 (pause / continue) or if an error occurs and you have pause on errors .
Off course any debugger; lines debugger; will also make execution stop.
To ignore errors, on the Sources tab at the bottom there is a small circle icon that you can click on 3 states.
- Gray states = Do not pause using exceptions
- Blue state = Pause in all exceptions
- Violet = Pause only on uncaught exceptions
See the image below for the icon I'm referring to, click it for different states.
In addition, to the right of the image you can see different sections, such as: DOM Breakpoints and XHR Breakpoints , etc. Make sure they don't have breakpoints, anyway.
Hope this helps.

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