Inbreeding / Pain / Genetics Algorithm Ratio

Question

I am looking for a good pseudocode or, even better, the actual code snippets - when implementing the algorithm algorithm in the genealogy database that I have for the sheep stored in the SQL Server database.

I have a very old C program that worked against a flat text file until the population got such a large algorithm, since all this was done in memory, so an implementation against the database would be preferable ...

Has anyone seen something like this that they can point me to?

Answer 1

If you don't want to roll back your own, you can use the Python pypedal package to compute the inbreeding coefficient that supports SQL databases .

Pipedal code for calculating the inbreeding coefficient here .